The detailed information of tRNA gene sequence


Sequence ID>WENV170008172
Genome IDAMZC01003537
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 4001
End posion on genome 3926
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgcccgcgc
tRNA gene sequence 
AGGGGTATAGCTCAGTTGGTAGAGCGGCGGTCTCCAAAACCGCAGGTCGCGGGTTCAAGT
CCTGCTGCCCCTGCCA
Downstream region at tRNA end position 
tttcccgcaa
Secondary structure (Cloverleaf model)
>WENV170008172	Trp	CCA
                   c      GCCA tttcccgcaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     A - T          T G
                    T     C G T C C     A
      T G A        A      | | + | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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