The detailed information of tRNA gene sequence


Sequence ID>WENV170008174
Genome IDAMZC01003635
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 144
End posion on genome 69
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
caggcaaaaT
tRNA gene sequence 
GGGCTCGTGGTCTAGTCGGTCATGACATCGCCTTTACACGGCGGGGATCCTGAGTTCGAA
TCTCAGCGGGCCCATgc
Downstream region at tRNA end position 
tatttatcct
Secondary structure (Cloverleaf model)
>WENV170008174	Val	TAC
                   T      ATgc tatttatcct
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A C T C     A
      T G A        G      | | | | |     G
    C       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T C A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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