The detailed information of tRNA gene sequence


Sequence ID>WENV170008199
Genome IDAMZC01004330
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 12636
End posion on genome 12563
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aacacctgct
tRNA gene sequence 
GGCGACGTCGCCAAGTGGCAAGGCAAGGGTCTGCAAAACCCTCACCGTGGGTTCGATTCC
CACCGTCGCCTCCA
Downstream region at tRNA end position 
gccaaaaacg
Secondary structure (Cloverleaf model)
>WENV170008199	Cys	GCA
                   t      TCCA gccaaaaacg
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     C A C C C     A
        G A        C      | | | | |     G
      T     A C C G       G T G G G     C
      G       | | |                 T T
      G     A G G C
        C A        A     CACC
                    A - T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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