The detailed information of tRNA gene sequence


Sequence ID>WENV170008217
Genome IDAMZC01004988
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1134
End posion on genome 1043
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgcgccgagc
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTCGAAAGCGCCCGCCTGCTAAGTGGGTAAGGGGCGAAAGCCC
CTTCTCGGGTTCGAATCCCGATCTCTCCGCCA
Downstream region at tRNA end position 
gattcctttc
Secondary structure (Cloverleaf model)
>WENV170008217	Ser	GCT
                   c      GCCA gattcctttc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       T C G G G     C
    G         | | |                 T T
    T       A A G C
      C G A        G     TAAGGGGCGAAAGCCCCTTC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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