The detailed information of tRNA gene sequence


Sequence ID>WENV170008222
Genome IDAMZC01005122
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 2961
End posion on genome 2885
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cctttcgctc
tRNA gene sequence 
GGCGGCGTAGCTCAGTTGGTTAGAGCAAACGGTTCATACCCGTTAGGTCGTCAGTTCGAG
TCTGACCGCCGCTACCA
Downstream region at tRNA end position 
accctcttcg
Secondary structure (Cloverleaf model)
>WENV170008222	Met	CAT
                   c      ACCA accctcttcg
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A G T C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    A - T
                    A - T
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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