The detailed information of tRNA gene sequence


Sequence ID>WENV170008223
Genome IDAMZC01005209
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 2945
End posion on genome 3036
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcttggcgc
tRNA gene sequence 
GGAGTGGTGTCCGAGTGGTCTAAGGAGCGCGACTGGAAATCGCGTACTCGGCGAAAGCCG
GGTCGTGGGTTCGAATCCCACCCGCTCCGCCA
Downstream region at tRNA end position 
tccctgtgct
Secondary structure (Cloverleaf model)
>WENV170008223	Ser	GGA
                   c      GCCA tccctgtgct
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C T A        G     TACTCGGCGAAAGCCGGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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