The detailed information of tRNA gene sequence


Sequence ID>WENV170008235
Genome IDAMZC01005393
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 323
End posion on genome 398
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgccatcc
tRNA gene sequence 
GGGCCCGTAGCTCAGAGGTTAGAGCGTGCGGCTCATAACCGCTTGGTCGTGGGTTCGAAC
CCCACCGGGCCCACCA
Downstream region at tRNA end position 
aggccgcacc
Secondary structure (Cloverleaf model)
>WENV170008235	Met	CAT
                   c      ACCA aggccgcacc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     C A C C C     A
      A G A        A      | | | | |     G
    G       C T C G       G T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     TGGTC
                    T   T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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