The detailed information of tRNA gene sequence


Sequence ID>WENV170008252
Genome IDAMZC01006163
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 612
End posion on genome 525
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgcttagatT
tRNA gene sequence 
GGAGCGGTGTCCGAGGGGTTTAAGGAGACGGTCTTGAAAACCGCTGTACCGCAAGGTACC
GGGGGTTCGAATCCCCCCTGCTCCGTCg
Downstream region at tRNA end position 
tgagccacct
Secondary structure (Cloverleaf model)
>WENV170008252	Ser	TGA
                   T      GTCg tgagccacct
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G + T
                     G - C          T A
                    T     C C C C C     A
      G G A        G      | | | | |     G
    G       G C C T       G G G G G     C
    G         | | |                 T T
    T       A G G A
      T T A        G     TGTACCGCAAGGTACC
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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