The detailed information of tRNA gene sequence


Sequence ID>WENV170008256
Genome IDAMZC01006163
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 167
End posion on genome 80
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
ttctacccct
tRNA gene sequence
GGAGAGATGACCGAGCGGTCGAAGGTGCGCGATTGGAAGTCGCGTGTACCCGTAAGGGTA
CCGAGGGTTCAAATCCCTCTCTCTCCGCtt
Downstream region at tRNA end position
gcagtttgag
Secondary structure (Cloverleaf model)
>WENV170008256	Ser	GGA
                   t      GCtt gcagtttgag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     A
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      C G A        G     TGTACCCGTAAGGGTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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