The detailed information of tRNA gene sequence


Sequence ID>WENV170008278
Genome IDAMZC01007344
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1178
End posion on genome 1250
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gttcttgcgc
tRNA gene sequence 
CGCAGGGTAGAGCAGTTGGCAGCTCGTCGGGCTCATAACCCGGAGGTCGGAGGTTCGAGT
CCTCCCCCTGCTAgaa
Downstream region at tRNA end position 
cgagtttaag
Secondary structure (Cloverleaf model)
>WENV170008278	Met	CAT
                   c      Agaa cgagtttaag
                     C   T
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     C C T C C     A
      T G A        A      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      C A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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