The detailed information of tRNA gene sequence


Sequence ID>WENV170008288
Genome IDAMZC01007770
Search identical group
Phylum/Class[AMZC] bioreactor sludge metagenome; anaerobic thermophilic cellulolytic sludge from lab reactor
Species
Start position on genome 1286
End posion on genome 1363
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tgatcgcgct
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTTAGCGCGCCTGGTTCGGGACCAGGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
tttttttgat
Secondary structure (Cloverleaf model)
>WENV170008288	Pro	CGG
                   t      ACCA tttttttgat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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