The detailed information of tRNA gene sequence


Sequence ID>WENV170008389
Genome IDAOMP01001387
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 1061
End posion on genome 1150
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttggtaattt
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGCCGATTGTACTTGCTTGGAAAGCAAGCGACCCGTAAAAAGGT
CCGTGGGTTCGAATCCCACACTCTCCGCCA
Downstream region at tRNA end position 
aatttattgt
Secondary structure (Cloverleaf model)
>WENV170008389	Ser	GGA
                   t      GCCA aatttattgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | +                 T T
    C       T T G T
      C G A        A     CGACCCGTAAAAAGGTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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