The detailed information of tRNA gene sequence


Sequence ID>WENV170008396
Genome IDAOMP01001405
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 541
End posion on genome 616
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgcatcctat
tRNA gene sequence 
GGGGGTGTAGCTCAGTTGGAAGAGCGTCTGCTTTGCAAGCAGAATGTCCAGGGTTCGAGT
CCCTGTACCTCCACCA
Downstream region at tRNA end position 
tgcccttgaa
Secondary structure (Cloverleaf model)
>WENV170008396	Ala	TGC
                   t      ACCA tgcccttgaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G + T          T G
                    T     G T C C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          G     ATGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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