The detailed information of tRNA gene sequence


Sequence ID>WENV170008423
Genome IDAOMP01003879
Search identical group
Phylum/Class[AOMP] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 113
End posion on genome 189
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaacgttacc
tRNA gene sequence 
GGACAGGTAGCTCAGTTGGTTAGAGAGACGGTTTCATAAGCCGTAGGTCGTGGGTTCGAC
TCCCGCCCTGTCCACCA
Downstream region at tRNA end position 
attcatgctg
Secondary structure (Cloverleaf model)
>WENV170008423	Met	CAT
                   c      ACCA attcatgctg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T C
                    T     C G C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | |                   T T
    G       G A G A
      T T A        G     AGGTC
                    A - T
                    C - G
                    G - C
                    G - C
                    T + G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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