The detailed information of tRNA gene sequence


Sequence ID>WENV170008486
Genome IDAOMQ01000258
Search identical group
Phylum/Class[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 2031
End posion on genome 1946
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
acagaaaaac
tRNA gene sequence 
GCCCTGTTGGTGGAATCGGTAGACACGTTGGTTTCAGGGACCAGAGTCCATGAGACGTAC
AGGTTCGAGTCCTGTACAGGGCACCA
Downstream region at tRNA end position 
aaaatgtaac
Secondary structure (Cloverleaf model)
>WENV170008486	Leu	CAG
                   c      ACCA aaaatgtaac
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C
                     T - A          T G
                    T     T G T C C     A
      T A A        G      | | | | |     G
    C       G G T G       A C A G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     AGTCCATGAGACGT
                    T + G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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