The detailed information of tRNA gene sequence


Sequence ID>ENV08001897
Genome IDABOJ01016098
Search identical group
Phylum/Classsaltern metagenome; viral fraction from medium salinity saltern in San Diego, CA
Species
Start position on genome 108
End posion on genome 34
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GCTCGGTTGGTGTAGTCCGGCCAATCATCTTGGCCTTTCGAGCCGAGGACACGGGTTCGA
ATCCCGTACCGAGCAgtt
Downstream region at tRNA end position 
aagtacatgg
Secondary structure (Cloverleaf model)
>ENV08001897	Glu	TTC
                   c      Agtt aagtacatgg
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T G C C C     A
    C T G A        G      | | | | |     G
  C         T G T G       A C G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        C     GGAC
                    T - A
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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