The detailed information of tRNA gene sequence


Sequence ID>WENV170008574
Genome IDAOMQ01004341
Search identical group
Phylum/Class[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 501
End posion on genome 427
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cacatataat
tRNA gene sequence 
GGCTCCTTAACTCAACGGCAGAGTGTCCGCCTGTCTAGCGGAATGTTACGGGTTCAAATC
CCGTAGGGGTCGCCA
Downstream region at tRNA end position 
atttacgccc
Secondary structure (Cloverleaf model)
>WENV170008574	Asp	GTC
                   t      GCCA atttacgccc
                     G - C
                     G + T
                     C - G
                     T + G
                     C - G
                     C - G
                     T - A          T A
                    T     T G C C C     A
        A A        A      | | | | |     A
      C     C T C A       A C G G G     C
      G     | | | |                 T T
      G     G A G T
        C A        G     ATGTT
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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