The detailed information of tRNA gene sequence


Sequence ID>WENV170008628
Genome IDAOMQ01009299
Search identical group
Phylum/Class[AOMQ] mine drainage metagenome; low temperature acidic, metal-polluted mine stream
Species
Start position on genome 475
End posion on genome 402
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttcaacctat
tRNA gene sequence 
TTCGGCGTCGTCCAATGGTAGGACTGCGGTCTCCAAAGCCGCCTATCGCGGTTCGAGTCC
GTGCGCCGAAGCCA
Downstream region at tRNA end position 
attcagtttt
Secondary structure (Cloverleaf model)
>WENV170008628	Trp	CCA
                   t      GCCA attcagtttt
                     T - A
                     T - A
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     G T G C C     A
        A A        C      | + | | |     G
      T     C C T G       C G C G G     C
      G     | | | |                 T T
      G     G G A C
        T A        T     CTAT
                    G - C
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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