The detailed information of tRNA gene sequence


Sequence ID>WENV170008892
Genome IDAPHM01013316
Search identical group
Phylum/Class[APHM] hypersaline lake metagenome; filtered surface water from Lake Tyrrell
Species
Start position on genome 1110
End posion on genome 1184
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcaccggta
tRNA gene sequence 
GGGCCCTTAGCTTAGTCTGGTAAGAGCGCCGAGCTCATAACTCGGTGGTCATTGGTTCAA
ATCCGATAGGGCCCAtgt
Downstream region at tRNA end position 
cttcgacaaa
Secondary structure (Cloverleaf model)
>WENV170008892	Met	CAT
                   a      Atgt cttcgacaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     T A G C C     A
    C T G A        A      | | + | |     A
  T         T T C G       A T T G G     C
  G         + | | |                 T T
  G         G A G C
    T A A          G     TGGTC
                    C - G
                    C - G
                    G - C
                    A - T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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