The detailed information of tRNA gene sequence


Sequence ID>WENV170009056
Genome IDAPHM01021003
Search identical group
Phylum/Class[APHM] hypersaline lake metagenome; filtered surface water from Lake Tyrrell
Species
Start position on genome 1979
End posion on genome 2068
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagacaccaa
tRNA gene sequence 
GCCGAGGTGACAGAGTCTGGTCAATTGTGCCAGCCTGGAAAGCTGGTGATCCTTAAACGG
ATCTCCTGGGTTCGAATCCCAGCCTCGGCGaaa
Downstream region at tRNA end position 
attaaaacct
Secondary structure (Cloverleaf model)
>WENV170009056	Ser	GGA
                   a      Gaaa attaaaacct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G A C C C     A
    C T G A        G      | | | | |     G
  T         G A C A       C T G G G     C
  G         + | | |                 T T
  G         T T G T
    T C A A        G     TGATCCTTAAACGGATCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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