The detailed information of tRNA gene sequence


Sequence ID>WENV170009179
Genome IDAPHM01021501
Search identical group
Phylum/Class[APHM] hypersaline lake metagenome; filtered surface water from Lake Tyrrell
Species
Start position on genome 958
End posion on genome 1043
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aaattgatgt
tRNA gene sequence 
GTTGCGGTAGCCAAGTCTGGCCCAAGGCGCTGGATTGCTAATTCAGTGGCGTAATGCCTC
CGGGGTTCGAATCCCCGCCGCAACGCtc
Downstream region at tRNA end position 
attggaatca
Secondary structure (Cloverleaf model)
>WENV170009179	Ser	GCT
                   t      GCtc attggaatca
                     G - C
                     T - A
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     G C C C C     A
    C T G A        A      | | | | |     G
  T         A C C G       C G G G G     C
  G           | | |                 T T
  G         A G G C
    C C C A        G     TGGCGTAATGCCTC
                    C - G
                    T - A
                    G - C
                    G + T
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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