The detailed information of tRNA gene sequence


Sequence ID>ENV08001905
Genome IDABOK01001322
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 101
End posion on genome 16
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
actttcccga
tRNA gene sequence 
GCCCGGGTGGTGAAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCTTATGGCTGTGC
AGGTTCAAGTCCCGCCCCGGGTACCA
Downstream region at tRNA end position 
gggaataaaa
Secondary structure (Cloverleaf model)
>ENV08001905	Leu	TAA
                   a      ACCA gggaataaaa
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | |   | |     A
    C       A G T G       G C A G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGCTTATGGCTGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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