The detailed information of tRNA gene sequence


Sequence ID>WENV170009372
Genome IDAPMI01000107
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 488
End posion on genome 564
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
acaggtacgg
tRNA gene sequence 
GGGTCAGTAGCTCAGTCGGTTAGAGCACCGTCTTGATAAGGCGGGGGTCGTAGGTTCGAT
TCCTACCTGACCCACCA
Downstream region at tRNA end position 
gcgcgactca
Secondary structure (Cloverleaf model)
>WENV170009372	Ile	GAT
                   g      ACCA gcgcgactca
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C A T C C     A
      T G A        A      | | | | |     G
    C       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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