The detailed information of tRNA gene sequence


Sequence ID>ENV08001907
Genome IDABOK01002554
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 26
End posion on genome 118
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caagccatca
tRNA gene sequence 
GCCCGGGTGGTGAAATTGGTAGACACAACGGACTTAAAATCCGTCGCTTACCGTAAAAGG
GGCGTACCGGTTCGATTCCGGTCCCGGGCACCA
Downstream region at tRNA end position 
aaacgtgtag
Secondary structure (Cloverleaf model)
>ENV08001907	Leu	TAA
                   a      ACCA aaacgtgtag
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     T G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       A C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTTACCGTAAAAGGGGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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