The detailed information of tRNA gene sequence


Sequence ID>WENV170009662
Genome IDAPMI01001359
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 200
End posion on genome 124
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ctgctcattt
tRNA gene sequence 
CGGGATGTAGCGCAGCCCGGTAGCGTGCTTCGTTCGGGACGAAGAGGTCGCTGGTTCGAA
TCCAGTCATCCCGACAA
Downstream region at tRNA end position 
aaaaagaggc
Secondary structure (Cloverleaf model)
>WENV170009662	Pro	CGG
                   t      ACAA aaaaagaggc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    C       C G C G       G C T G G     C
    C       | | | +                 T T
    G       G C G T
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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