The detailed information of tRNA gene sequence


Sequence ID>ENV08001908
Genome IDABOK01003484
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 39
End posion on genome 131
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
caagccatca
tRNA gene sequence 
GCCCGGGTGGTGAAATTGGTAGACACAACGGACTTAAAATCCGTCGCTTACCGTAAAAGG
GGCGTACCGGTTCGATTCCGGTCCCGGGCACCA
Downstream region at tRNA end position 
aaannnnnnn
Secondary structure (Cloverleaf model)
>ENV08001908	Leu	TAA
                   a      ACCA aaannnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T T
                    T     T G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       A C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGCTTACCGTAAAAGGGGCGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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