Sequence ID | >ENV08001910 |
Genome ID | ABOK01004780 |
Phylum/Class | mosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA |
Species | |
Start position on genome
|
125
|
End posion on genome
|
49
|
Amino Acid
|
Asp
|
Anticodon
|
GTC
|
Upstream region at tRNA start position
|
nnccaactct
|
tRNA gene sequence
|
GGAGTGGTAGTTCAGTTGGTTAGAATACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG CCCCGTCCACTCCGCCA
|
Downstream region at tRNA end position
|
aacaaaaaag
|
Secondary structure (Cloverleaf model) | >ENV08001910 Asp GTC
t GCCA aacaaaaaag
G - C
G - C
A - T
G - C
T - A
G - C
G - C C G
T T G C C C A
T G A A + | | | | G
T C T T G G C G G G C
G | | | + T T
G G A A T
T T A A GGGTC
C - G
C - G
G - C
G - C
C - G
C C
T A
G T C
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |