The detailed information of tRNA gene sequence


Sequence ID>ENV08001912
Genome IDABOK01005920
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 61
End posion on genome 132
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggtccgcagc
tRNA gene sequence 
GTCCCCGTAGTTAAACGGATATAACAAGCCCCTCCTAAGGGCTAGTTACTGGTTCGATTC
CAGTCGGGGACAnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001912	Arg	CCT
                   c      Annn nnnnnnnnnn
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G A C C     A
      C A A        A      | | | | |     G
    G       A T T G       A C T G G     C
    G       | | | |                 T T
    A       T A A C
      T A          A     AGTT
                    A - T
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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