The detailed information of tRNA gene sequence


Sequence ID>WENV170010104
Genome IDAPMI01008529
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 12973
End posion on genome 13045
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
taataactta
tRNA gene sequence 
TCCCCGGTCGTTCAATGGTTAGGACATCGGACTCTAAATCCGAGAACCAGGGTTCGATTC
CCTGTCGAGGAGCtt
Downstream region at tRNA end position 
ttttacttct
Secondary structure (Cloverleaf model)
>WENV170010104	Sup	CTA
                   a      GCtt ttttacttct
                     T - A
                     C - G
                     C - G
                     C   A
                     C - G
                     G - C
                     G + T          T T
                    T     G T C C C     A
      T A A        C      | | | | |     G
    G       C T T G       C A G G G     C
    G       | + | |                 T T
    T       G G A C
      T A          A     GAAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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