The detailed information of tRNA gene sequence


Sequence ID>ENV08001913
Genome IDABOK01007808
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 118
End posion on genome 44
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ggtccgcagc
tRNA gene sequence 
GTCCCCGTAGTTAAACGGATATAACAAGCCCCTCCTAAGGGCTAGTTACTGGTTCGATTC
CAGTCGGGGACACCA
Downstream region at tRNA end position 
ttctttctca
Secondary structure (Cloverleaf model)
>ENV08001913	Arg	CCT
                   c      ACCA ttctttctca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T T
                    T     T G A C C     A
      C A A        A      | | | | |     G
    G       A T T G       A C T G G     C
    G       | | | |                 T T
    A       T A A C
      T A          A     AGTT
                    A - T
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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