The detailed information of tRNA gene sequence


Sequence ID>ENV08001915
Genome IDABOK01011486
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 98
End posion on genome 23
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
attttattaa
tRNA gene sequence 
GTCCCTATCGTCTAGAGGCCTAGGACATCGCCCTTTCACGGCGGTAACCGGGGTTCGAAT
CCCCGTAGGGACGCCA
Downstream region at tRNA end position 
ttacttaaag
Secondary structure (Cloverleaf model)
>ENV08001915	Glu	TTC
                   a      GCCA ttacttaaag
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     G C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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