The detailed information of tRNA gene sequence


Sequence ID>ENV08001917
Genome IDABOK01014385
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 36
End posion on genome 110
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttaacgcccc
tRNA gene sequence 
GGCGGGGTAGCTCAGGTGGTTAGAGCGTTGGATTCATAACCCAAAGGTCTCGGGTTCAAC
TCCCGATCCCGCTACag
Downstream region at tRNA end position 
aatagaaaat
Secondary structure (Cloverleaf model)
>ENV08001917	Met	CAT
                   c      ACag aatagaaaat
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T          T C
                    T     A G C C C     A
      G G A        A      | | | | |     A
    T       C T C G       T C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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