The detailed information of tRNA gene sequence


Sequence ID>WENV170010621
Genome IDAPMI01022854
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 459
End posion on genome 533
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position
tttaaggtag
tRNA gene sequence
GCCCATGTAGCTCAGTGGTAGAGCACTCCCTTGGTAAGGGAGAGGTCGGAAGTTCGATTC
TTCTCATGGGCACCA
Downstream region at tRNA end position
ccgatttagc
Secondary structure (Cloverleaf model)
>WENV170010621	Thr	GGT
                   g      ACCA ccgatttagc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A
                     G - C          T T
                    T     T C T T C     A
        G A        A      + | | | |     G
      T     C T C G       G G A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     AGGTC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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