The detailed information of tRNA gene sequence


Sequence ID>WENV170011042
Genome IDAPMI01040903
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 769
End posion on genome 864
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
atttcatgaa
tRNA gene sequence 
GGAAGAGAAGCGTCCCTGGTGGGGCGGCCGGGCTTCAAACCCGGTTGGCGGCGCCATGCG
TTGCCGGGTGGGTTCGACTCCCATTCTCTTCCGCCA
Downstream region at tRNA end position 
gtttccgccg
Secondary structure (Cloverleaf model)
>WENV170011042	SeC	TCA
                   a      GCCA gtttccgccg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T C
                    A     T A C C C     A
      T C C        G      + | | | |     G
    G       C T G C       G T G G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     TTGGCGGCGCCATGCGTTGCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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