The detailed information of tRNA gene sequence


Sequence ID>WENV170011054
Genome IDAPMI01041119
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 365
End posion on genome 440
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
aataaaaaac
tRNA gene sequence 
GGTTCAGTGGTGTACTTGGTGTGCACGTTAGTTTGAAGCACTAAAGGTATTTGTTCGATT
CAAATCTGAACCACAA
Downstream region at tRNA end position 
aaaatttaaa
Secondary structure (Cloverleaf model)
>WENV170011054	Phe	GAA
                   c      ACAA aaaatttaaa
                     G - C
                     G - C
                     T - A
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     T A A A C     A
      T C A        G      | | | | |     G
    T       T G T G       A T T T G     C
    G       + | | |                 T T
    G       G C A C
      T G T        G     AGGT
                    T - A
                    T - A
                    A - T
                    G - C
                    T - A
                  T       C
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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