The detailed information of tRNA gene sequence


Sequence ID>WENV170011226
Genome IDAPMI01050902
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 301
End posion on genome 377
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gttggagcct
tRNA gene sequence 
GGGGATATAGCTCAGTTGGCTAGAGCACCTGCTTTGCAAGCAGGGGGTCCAGAGTTCGAG
TCTCTGTATCTCCACCA
Downstream region at tRNA end position 
agatagcata
Secondary structure (Cloverleaf model)
>WENV170011226	Ala	TGC
                   t      ACCA agatagcata
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     G T C T C     A
      T G A        A      | | | | |     G
    T       C T C G       C A G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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