Sequence ID | >ENV08001924 |
Genome ID | ABOK01029310 |
Phylum/Class | mosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA |
Species | |
Start position on genome
|
119
|
End posion on genome
|
44
|
Amino Acid
|
Met
|
Anticodon
|
CAT
|
Upstream region at tRNA start position
|
nnnnnnnctt
|
tRNA gene sequence
|
GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGTTGGTTCAAAC CCAACAGGGGCCACCA
|
Downstream region at tRNA end position
|
aatttttgct
|
Secondary structure (Cloverleaf model) | >ENV08001924 Met CAT
t ACCA aatttttgct
G - C
G - C
C - G
C - G
C - G
C - G
T - A C A
T C A A C C A
T G A A | | | | | A
G C T C G G T T G G C
G | | | | T T
T G A G C
T A A TGGTC
G + T
G - C
C - G
G - C
A - T
C A
T A
C A T
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |