The detailed information of tRNA gene sequence


Sequence ID>ENV08001926
Genome IDABOK01030671
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 94
End posion on genome 2
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gtcagccggc
tRNA gene sequence 
GCCCCGATGGTGAAATTGGTAGACACTGCGGACTTAAAATCCGCCGCTTTCCTGAAAAGG
GGCGTGCCGGTTCGACCCCGGCTCGGGGCACCA
Downstream region at tRNA end position 
gnnnnnnnnn
Secondary structure (Cloverleaf model)
>ENV08001926	Leu	TAA
                   c      ACCA gnnnnnnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T          C C
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       A G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        T     CGCTTTCCTGAAAAGGGGCGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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