The detailed information of tRNA gene sequence


Sequence ID>WENV170011816
Genome IDAPMI01094042
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 894
End posion on genome 981
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cccgatcaat
tRNA gene sequence 
GGAGAGGTGCCGGAGCGGCCAGTCGGCGCATGTTGGAAGCATGACGGGCGGCAACGCCAC
GCGAGTTCAAATCTCGCCTTCTCCGCCA
Downstream region at tRNA end position 
ttcgtggatg
Secondary structure (Cloverleaf model)
>WENV170011816	Ser	GGA
                   t      GCCA ttcgtggatg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C G C T C     A
      C G A        G      | | | | |     A
    G       G G C C       G C G A G     C
    G       + | | |                 T T
    C       T C G G
      C A G        C     CGGGCGGCAACGCCAC
                    G   A
                    C - G
                    A - T
                    T - A
                    G - C
                  T       G
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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