The detailed information of tRNA gene sequence


Sequence ID>WENV170012085
Genome IDAPMI01118754
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 620
End posion on genome 695
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgtatatag
tRNA gene sequence 
TGCGGGGTGGAGCAGTTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGCACGTTCGAGT
CGTGTCCCCGCTACCA
Downstream region at tRNA end position 
aaataagtgc
Secondary structure (Cloverleaf model)
>WENV170012085	Met	CAT
                   g      ACCA aaataagtgc
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     T G T G C     A
      T G A        G      + | | | |     G
    T       C G A G       G C A C G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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