The detailed information of tRNA gene sequence


Sequence ID>WENV170012163
Genome IDAPMI01128904
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1407
End posion on genome 1318
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cgagcgatgc
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTTGAAGGCGCACGCCTGGAAAGTGTGTATACGGGGAACCGTA
TCGCGGGTTCGAATCCCGCTCTCTCCGCCA
Downstream region at tRNA end position 
gctaattcct
Secondary structure (Cloverleaf model)
>WENV170012163	Ser	GGA
                   c      GCCA gctaattcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TATACGGGGAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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