The detailed information of tRNA gene sequence


Sequence ID>WENV170012269
Genome IDAPMI01143916
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 689
End posion on genome 615
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atcgaactac
tRNA gene sequence 
GGGCGGTTGGCTCAGTGGTAGAGCACTTCGTTCACACCGAAGGGGTCGTTGGTTCGAATC
CAATACCGCCCACCA
Downstream region at tRNA end position 
cttatttcat
Secondary structure (Cloverleaf model)
>WENV170012269	Val	CAC
                   c      ACCA cttatttcat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          T A
                    T     T A A C C     A
        G A        G      + | | | |     G
      T     C T C G       G T T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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