The detailed information of tRNA gene sequence


Sequence ID>WENV170012379
Genome IDAPMI01165668
Search identical group
Phylum/Class[APMI] wastewater metagenome; sequencing batch reactors (SBR) enriched microbial communities from a Danish wastwater
Species
Start position on genome 1040
End posion on genome 1114
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ggaataagtt
tRNA gene sequence 
CGGGACGTAGCGCAGCCCGGTAGCGCACTTGCATGGGGTGCAAGGGGTCGCTGGTTCGAA
TCCAGTCGTCCCGACtg
Downstream region at tRNA end position 
agttatagct
Secondary structure (Cloverleaf model)
>WENV170012379	Pro	GGG
                   t      ACtg agttatagct
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    C       C G C G       G C T G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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