The detailed information of tRNA gene sequence


Sequence ID>ENV08001936
Genome IDABOK01051244
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 30
End posion on genome 106
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagaatcggt
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAN
CCCCGTCCGTTCCGCCA
Downstream region at tRNA end position 
cttatttaat
Secondary structure (Cloverleaf model)
>ENV08001936	Asp	GTC
                   t      GCCA cttatttaat
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G - C          C N
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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