The detailed information of tRNA gene sequence


Sequence ID>WENV170012481
Genome IDASRK01003094
Search identical group
Phylum/Class[ASRK] bioreactor metagenome; day 48 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 321
End posion on genome 410
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
agcgaattgc
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTGAAGGAGCTCGCCTGGAAAGCGTGTATAGGAGAAATCTTA
TCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
tacagcctac
Secondary structure (Cloverleaf model)
>WENV170012481	Ser	GGA
                   c      GCCA tacagcctac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATAGGAGAAATCTTATC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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