The detailed information of tRNA gene sequence


Sequence ID>ENV08001937
Genome IDABOK01053031
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 96
End posion on genome 21
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaggtaaagt
tRNA gene sequence 
GGGGCTGTAGCTCAGCGGTTAGAGCAGAGGACTCATAATCCTTTGGTCGAGGGTTCGAAC
CCCTCCGGCCCTACCA
Downstream region at tRNA end position 
cattgattgg
Secondary structure (Cloverleaf model)
>ENV08001937	Met	CAT
                   t      ACCA cattgattgg
                     G + T
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     G - C          C A
                    T     C T C C C     A
      C G A        A      | | | | |     G
    G       C T C G       G A G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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