The detailed information of tRNA gene sequence


Sequence ID>WENV170012587
Genome IDASRM01000075
Search identical group
Phylum/Class[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 1199
End posion on genome 1274
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
ccactttttt
tRNA gene sequence
GGAGGTATAGCAAAGTTGGTAATGCCCGGGATTGCAAATCCTGTATGCGTCGGTTCGAGT
CCGGCTACCTCCTCCA
Downstream region at tRNA end position
ctaatttcaa
Secondary structure (Cloverleaf model)
>WENV170012587	Cys	GCA
                   t      TCCA ctaatttcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     A - T          T G
                    T     C G G C C     A
      T G A        A      | + | | |     G
    T       A A C G       G T C G G     C
    G         | | |                 T T
    G       A T G C
      T A          C     TATGC
                    C - G
                    G + T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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