The detailed information of tRNA gene sequence


Sequence ID>WENV170012611
Genome IDASRM01002086
Search identical group
Phylum/Class[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 927
End posion on genome 838
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
agcgaattgc
tRNA gene sequence
GGTGAAGTGTCCGAGTGGCTGAAGGAGCTCGCCTGGAAAGCGTGTATAGGAGAAATCTTA
TCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position
tacagcctac
Secondary structure (Cloverleaf model)
>WENV170012611	Ser	GGA
                   c      GCCA tacagcctac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATAGGAGAAATCTTATC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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