The detailed information of tRNA gene sequence


Sequence ID>WENV170012626
Genome IDASRM01005205
Search identical group
Phylum/Class[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 163
End posion on genome 73
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttcagttT
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGGTCGTTAATAGCG
GCGCGAGGGTTCAAATCCCTCCTTCTCCGTta
Downstream region at tRNA end position 
gtttttaaga
Secondary structure (Cloverleaf model)
>WENV170012626	Ser	GCT
                   T      GTta gtttttaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGTTAATAGCGGCGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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