The detailed information of tRNA gene sequence


Sequence ID>WENV170012642
Genome IDASRM01013916
Search identical group
Phylum/Class[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 257
End posion on genome 181
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtgaaaattt
tRNA gene sequence 
GGGTCTGTAGCTCAGCTGGTTAGAGCGCTCGCCTGATAAGCGGGAGGTCGGTGGTTCAAG
TCCACTCAGACCCACCA
Downstream region at tRNA end position 
aattttcctt
Secondary structure (Cloverleaf model)
>WENV170012642	Ile	GAT
                   t      ACCA aattttcctt
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      C G A        A      + | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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